src.original.preprocessing package

Subpackages

• src.original.preprocessing.EP_GU package
  • Submodules
  • src.original.preprocessing.EP_GU.brain_pipeline module
  • src.original.preprocessing.EP_GU.outlier_removal module
    • at_least_1d()
    • ballistic()
    • check_regime()
    • diffusive()
    • kurtosis()
    • monoexp()
    • roi_based()
    • sIVIM()
  • Module contents
• src.original.preprocessing.MG_LU package
  • Submodules
  • src.original.preprocessing.MG_LU.TOPED_fsl_commands module
    • TOPED
      • TOPED.copy_from_wsl()
      • TOPED.copy_to_wsl()
      • TOPED.ensure_dir()
      • TOPED.get_corrected_name()
      • TOPED.get_corrected_name_eddy()
      • TOPED.get_jacobian_name()
      • TOPED.get_log_name()
      • TOPED.get_patient_workdir()
      • TOPED.get_warpfig_name()
      • TOPED.run_command()
      • TOPED.run_eddy()
      • TOPED.run_topup()
      • TOPED.split_nifti_gz()
  • src.original.preprocessing.MG_LU.TOPED_fsl_runner module
  • Module contents

Module contents